Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013450.1 Corchorus olitorius cultivar O-4 contig13483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53255

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2883--2992
58
1.9
58
85
7
152
34
18
13
33
1.90
4486--4520
2
17.5
2
100
0
70
48
0
0
51
1.00
6133--6157
1
25.0
1
100
0
50
100
0
0
0
0.00
10729--10773
3
15.0
3
100
0
90
33
0
0
66
0.92
11355--11385
14
2.2
14
94
0
53
38
22
3
35
1.71
13650--13722
33
2.2
33
95
0
128
31
5
19
43
1.73
17211--17246
2
18.0
2
100
0
72
50
50
0
0
1.00
22306--22341
17
2.1
17
100
0
72
41
5
11
41
1.64
30967--30994
3
9.3
3
100
0
56
0
32
0
67
0.91
38314--38382
34
2.0
34
100
0
138
30
5
28
34
1.81
38489--38523
6
5.8
6
100
0
70
17
0
31
51
1.45
49124--49154
2
15.5
2
100
0
62
51
48
0
0
1.00

Tables:   1

The End!