Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013453.1 Corchorus olitorius cultivar O-4 contig13486, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36553

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2112--2228
28
4.3
27
87
2
126
18
18
23
39
1.92
2126--2230
28
3.8
28
89
1
140
19
19
23
38
1.93
10888--10918
14
2.2
14
94
0
53
45
25
6
22
1.76
11912--11960
25
2.0
25
95
0
89
53
0
38
8
1.31
13451--13487
19
1.9
19
94
0
65
51
8
8
32
1.61
15449--15485
19
1.9
19
88
0
56
51
5
8
35
1.55
18220--18261
22
1.9
22
85
0
57
28
23
28
19
1.98
34274--34362
23
3.8
23
77
1
88
17
8
17
55
1.68

Tables:   1

The End!