Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013460.1 Corchorus olitorius cultivar O-4 contig13493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41221

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5796--6022
22
9.5
22
70
13
148
39
14
21
24
1.91
5796--6039
97
2.5
97
97
0
461
39
15
20
25
1.91
6270--6299
2
15.0
2
100
0
60
50
0
0
50
1.00
8340--8395
28
2.0
28
100
0
112
39
14
14
32
1.86
18594--18623
2
15.0
2
100
0
60
50
0
0
50
1.00
24056--24185
64
2.0
64
92
0
215
40
9
12
38
1.75
26520--26653
63
2.2
62
89
2
198
35
13
10
41
1.79
29434--29624
87
2.2
88
84
5
237
30
7
21
39
1.82
37279--37394
33
3.7
29
76
19
101
37
15
17
29
1.90
39872--39946
16
4.7
16
78
6
89
40
40
13
6
1.71

Tables:   1

The End!