Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013465.1 Corchorus olitorius cultivar O-4 contig13498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7510

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2787--2849
13
4.3
14
73
23
58
69
14
1
14
1.26
2791--2860
5
14.6
5
72
21
53
67
15
1
15
1.31
2804--2860
19
3.2
16
77
20
51
66
15
1
15
1.33
2790--2860
11
6.8
11
70
27
57
67
15
1
15
1.30
2788--2861
24
3.2
25
78
17
88
68
14
1
14
1.27
3460--3707
50
5.0
50
94
0
415
33
16
13
36
1.88
4214--4457
35
7.0
35
89
0
337
29
21
21
27
1.98
4732--4783
27
1.9
27
92
0
86
21
11
25
42
1.86
6047--6076
15
1.9
16
93
6
53
53
10
23
13
1.69
7442--7507
24
2.6
24
83
7
69
13
18
19
48
1.81

Tables:   1

The End!