Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013466.1 Corchorus olitorius cultivar O-4 contig13499, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19101

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1258--1284
1
27.0
1
100
0
54
100
0
0
0
0.00
1563--1810
50
5.0
50
94
2
426
32
15
14
37
1.88
2137--2210
26
2.8
27
72
22
68
52
16
21
9
1.71
2398--2582
50
3.7
50
86
0
253
29
30
14
26
1.95
2598--2904
35
8.8
35
87
4
415
30
18
20
29
1.97
3164--3240
28
2.8
28
78
5
86
20
18
23
37
1.94
14058--14152
41
2.3
41
79
0
109
25
16
12
45
1.83
18620--18665
23
2.0
23
83
8
58
26
23
2
47
1.63
19060--19101
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!