Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013477.1 Corchorus olitorius cultivar O-4 contig13510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15403

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--580
23
3.3
23
88
0
107
52
22
6
18
1.68
531--597
20
3.2
20
83
10
80
53
22
7
16
1.67
531--618
43
2.0
43
84
0
113
53
20
7
18
1.69
549--618
23
3.2
22
84
12
90
55
20
8
15
1.66
526--633
23
4.8
23
77
12
73
52
21
8
17
1.70
2457--2483
13
2.1
13
100
0
54
7
0
44
48
1.31
2595--2678
42
2.0
43
88
9
127
35
23
17
22
1.95
12082--12124
21
2.0
21
82
8
52
23
4
6
65
1.37
14994--15085
21
4.4
21
94
2
150
27
18
27
27
1.98

Tables:   1

The End!