Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013481.1 Corchorus olitorius cultivar O-4 contig13514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4190

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230--356
33
3.8
33
75
6
114
42
19
10
27
1.84
245--371
66
1.9
66
86
0
182
40
21
10
27
1.85
2522--2564
22
2.0
22
90
0
68
20
23
32
23
1.98
2594--2635
21
2.0
21
90
0
66
19
16
35
28
1.93
2522--2706
71
2.6
71
90
0
298
18
22
27
31
1.97
2668--2707
21
1.9
21
94
0
71
15
22
37
25
1.93

Tables:   1

The End!