Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013488.1 Corchorus olitorius cultivar O-4 contig13521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15633

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--142
6
23.3
6
90
0
199
1
44
3
50
1.28
3--142
16
8.8
16
91
0
199
1
44
3
50
1.28
3--142
22
6.4
22
93
0
199
1
44
3
50
1.28
128--253
65
1.9
65
90
0
198
15
19
15
50
1.79
2480--2638
55
2.9
55
95
0
291
28
22
6
42
1.78
12392--12425
2
17.0
2
100
0
68
50
0
50
0
1.00
12823--12882
25
2.3
26
94
5
113
21
10
3
65
1.38
15605--15633
3
9.7
3
100
0
58
65
0
0
34
0.93

Tables:   1

The End!