Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013499.1 Corchorus olitorius cultivar O-4 contig13532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67762

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
1
37.0
1
94
0
65
2
0
0
97
0.18
1--40
13
3.2
13
92
7
73
5
0
0
95
0.29
2108--2135
11
2.5
11
100
0
56
57
7
17
17
1.62
6822--6859
2
19.0
2
100
0
76
50
0
0
50
1.00
7837--7888
21
2.6
21
84
6
72
36
9
21
32
1.86
18677--18853
64
2.7
64
80
6
187
37
21
14
25
1.92
37328--37429
49
2.1
49
98
0
195
43
5
6
44
1.55
38129--38175
23
2.0
25
83
8
62
65
0
4
29
1.11
48045--48114
3
23.3
3
100
0
140
67
0
0
32
0.91
48285--48522
120
2.0
121
87
2
345
40
12
18
28
1.86
48514--48682
82
2.1
82
86
0
230
37
20
13
28
1.90
65588--65614
14
1.9
14
100
0
54
70
14
0
14
1.17

Tables:   1

The End!