Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013510.1 Corchorus olitorius cultivar O-4 contig13543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41910

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4720--4799
42
1.9
42
84
0
106
42
11
33
12
1.78
9111--9181
28
2.6
28
88
2
99
35
25
18
21
1.95
11144--11197
21
2.6
21
75
13
58
18
7
5
68
1.33
15721--15770
21
2.5
20
75
18
57
18
8
6
68
1.36
22649--23143
67
7.4
67
87
4
698
44
14
18
22
1.86
25901--26484
194
3.0
194
99
0
1161
33
10
20
35
1.88
28467--28742
90
3.1
89
78
6
286
34
25
14
26
1.94
31957--31987
15
2.0
16
93
6
55
70
6
9
12
1.31
34052--34091
15
2.6
16
88
4
55
62
12
10
15
1.54

Tables:   1

The End!