Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013511.1 Corchorus olitorius cultivar O-4 contig13544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41325

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7824--7900
29
2.6
30
83
6
102
31
27
11
29
1.92
7972--8009
12
3.2
12
92
7
60
7
13
21
57
1.60
7977--8017
12
3.5
12
90
9
59
9
9
21
58
1.59
8166--8250
31
2.7
31
96
3
154
40
15
23
21
1.91
8230--8285
29
1.9
29
82
7
69
33
14
21
30
1.93
11573--11645
3
24.0
3
94
2
128
64
0
1
34
1.02
12253--12306
27
2.0
27
92
0
90
37
11
12
38
1.79
13937--13970
17
2.0
17
100
0
68
11
23
0
64
1.26
21855--21922
34
2.0
33
88
8
102
17
22
19
41
1.91

Tables:   1

The End!