Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013512.1 Corchorus olitorius cultivar O-4 contig13545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4853

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1099
19
2.1
19
85
0
51
12
38
0
48
1.42
1792--1830
19
2.1
19
85
0
51
12
38
2
46
1.56
3421--3693
56
4.9
57
78
10
230
28
16
6
48
1.71
3541--3734
56
3.6
53
76
7
176
27
15
6
50
1.68
3700--4361
32
20.8
32
76
8
523
27
15
7
49
1.71
4285--4327
15
2.9
15
83
16
63
25
16
4
53
1.62
4241--4376
67
2.0
67
90
2
211
25
17
6
50
1.70
3815--4354
125
4.2
127
80
9
435
27
15
7
48
1.73

Tables:   1

The End!