Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013515.1 Corchorus olitorius cultivar O-4 contig13548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27389

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
542--655
58
2.0
57
89
1
174
31
21
14
32
1.93
7626--7658
2
17.5
2
87
12
52
48
0
51
0
1.00
8689--8739
5
10.4
5
93
4
77
84
0
13
1
0.71
9290--9319
15
1.9
16
93
6
53
10
43
0
46
1.37
9630--9676
24
2.0
24
91
0
76
17
21
36
25
1.94
26287--26322
19
1.9
18
88
5
54
27
22
8
41
1.82
27130--27157
1
28.0
1
100
0
56
0
0
0
100
0.00
27180--27216
18
2.1
18
89
0
56
37
10
5
45
1.62

Tables:   1

The End!