Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013529.1 Corchorus olitorius cultivar O-4 contig13562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62431

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5227--5258
14
2.3
14
100
0
64
28
9
31
31
1.88
5774--5798
13
1.9
13
100
0
50
40
8
4
48
1.51
9139--9240
51
2.0
50
83
9
127
21
23
13
41
1.89
16136--16165
10
3.0
10
90
0
51
10
36
10
43
1.72
34006--34040
17
1.9
17
88
11
52
40
5
22
31
1.78
34633--34671
19
2.1
18
85
4
51
15
17
7
58
1.59
49585--49674
46
2.0
45
95
2
162
33
12
18
35
1.88
56123--56172
25
2.0
25
92
0
82
16
16
30
38
1.90
57833--57883
19
2.7
19
77
14
61
47
0
1
50
1.12
57837--57887
16
3.1
16
75
16
50
47
0
3
49
1.20
58656--58749
29
3.1
29
88
11
152
41
6
19
32
1.76
58656--58754
33
3.1
33
94
5
170
41
6
18
34
1.75

Tables:   1

The End!