Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013535.1 Corchorus olitorius cultivar O-4 contig13568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21564

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
620--735
56
2.1
56
83
6
146
39
18
0
41
1.51
1811--1998
93
2.0
93
96
0
349
30
16
13
39
1.87
3193--3226
15
2.3
15
90
5
52
26
20
8
44
1.81
6849--7355
253
2.0
254
98
0
980
32
19
25
23
1.97
13249--13708
178
2.6
176
81
4
494
36
16
14
33
1.88
17658--17736
33
2.4
32
77
10
88
25
8
13
51
1.70
18645--18703
31
1.9
31
89
0
91
49
1
20
28
1.59

Tables:   1

The End!