Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013540.1 Corchorus olitorius cultivar O-4 contig13573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25364

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97--188
34
2.6
34
84
10
114
44
9
11
33
1.74
12495--12531
3
12.3
3
100
0
74
64
0
0
35
0.94
12982--13010
14
2.0
15
93
6
51
75
0
0
24
0.80
20497--20535
18
2.1
19
86
13
55
28
15
20
35
1.93
24032--24083
12
3.6
14
82
17
63
57
1
0
40
1.10

Tables:   1

The End!