Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013541.1 Corchorus olitorius cultivar O-4 contig13574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11808

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--362
76
2.0
76
83
2
192
30
20
12
36
1.89
8567--8614
21
2.4
20
83
10
62
50
8
18
22
1.74
8723--8788
27
2.5
28
87
5
84
34
27
19
18
1.95
8739--8813
27
2.7
28
89
4
107
36
25
17
21
1.95
11313--11338
6
4.3
6
100
0
52
34
0
15
50
1.45
11531--11599
21
3.2
21
82
10
86
43
11
20
24
1.85
11634--11690
28
2.0
28
96
0
105
31
15
10
42
1.81
11777--11808
3
10.7
3
100
0
64
65
0
0
34
0.93

Tables:   1

The End!