Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013543.1 Corchorus olitorius cultivar O-4 contig13576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17045

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7689--7729
21
1.9
22
85
5
57
43
29
17
9
1.80
9576--9631
2
27.5
2
92
3
94
50
3
0
46
1.19
11393--11423
14
2.2
14
100
0
62
58
0
0
41
0.98
11419--11460
10
4.0
10
90
9
66
78
0
0
21
0.75
11415--11457
14
3.1
14
87
12
70
79
0
0
20
0.74
11400--11460
32
1.9
32
89
0
95
72
0
0
27
0.85
11400--11460
4
15.8
4
77
19
67
72
0
0
27
0.85

Tables:   1

The End!