Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013560.1 Corchorus olitorius cultivar O-4 contig13593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5167

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5005--5066
13
4.5
13
77
18
54
82
8
1
8
0.91
5021--5065
7
6.7
7
90
7
58
82
6
0
11
0.84
5006--5081
22
3.5
22
77
10
77
81
7
1
9
0.93
5002--5081
36
2.3
35
80
8
90
82
7
1
8
0.90
5004--5067
14
4.5
14
75
23
62
82
7
1
7
0.89
5062--5109
13
3.4
13
76
18
51
75
12
0
12
1.06
5019--5109
14
6.3
14
76
16
71
78
9
0
12
0.98

Tables:   1

The End!