Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013562.1 Corchorus olitorius cultivar O-4 contig13595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11648

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3367--3401
19
1.9
19
88
11
56
45
8
8
37
1.65
4242--4285
9
4.9
9
88
0
70
0
45
0
54
0.99
4242--4306
18
3.4
18
82
6
76
0
44
0
55
0.99
4230--4306
39
2.0
39
84
5
102
0
48
1
50
1.09
4239--4316
39
2.0
39
82
9
97
0
47
1
51
1.09
5087--5130
7
6.4
7
82
15
56
40
2
11
45
1.53
5094--5135
20
2.1
20
100
0
84
35
4
14
45
1.66
9315--9395
30
2.7
31
78
17
91
34
0
37
28
1.58
11418--11466
11
4.7
11
78
16
52
36
12
20
30
1.89
11418--11451
12
2.9
12
91
4
52
32
11
17
38
1.86
11419--11478
30
2.0
31
90
3
95
36
11
18
33
1.87

Tables:   1

The End!