Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013567.1 Corchorus olitorius cultivar O-4 contig13600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25377

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5217--5250
17
2.0
17
88
0
50
2
17
35
44
1.64
5152--5304
68
2.3
68
89
2
229
10
16
33
39
1.82
8525--8567
13
3.2
13
87
6
59
69
0
0
30
0.88
8515--8563
17
2.8
17
84
6
62
69
0
2
28
1.00
9119--9152
10
3.4
10
87
0
50
11
73
0
14
1.10
15049--15137
29
3.0
29
77
4
90
43
34
10
11
1.74
20390--20419
15
2.0
15
93
0
51
46
10
26
16
1.78
24933--24958
11
2.4
11
100
0
52
7
15
7
69
1.35

Tables:   1

The End!