Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013568.1 Corchorus olitorius cultivar O-4 contig13601, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12922

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2167--2308
76
1.9
76
81
8
173
17
28
28
24
1.97
4414--4556
40
3.5
40
72
3
115
23
15
13
48
1.80
8604--8644
21
2.0
21
100
0
82
24
19
9
46
1.80
8624--8683
31
2.0
30
93
3
102
25
16
6
51
1.68
8624--8672
15
3.2
15
71
5
53
24
18
4
53
1.62
8932--10598
836
2.0
836
97
0
3165
39
20
13
26
1.90

Tables:   1

The End!