Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013569.1 Corchorus olitorius cultivar O-4 contig13602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15072

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
266--340
27
2.8
27
81
2
89
34
22
22
20
1.96
800--834
16
2.2
16
100
0
70
11
37
0
51
1.38
861--1091
107
2.2
105
82
8
265
43
5
9
41
1.61
9683--9714
11
2.9
11
100
0
64
0
28
56
15
1.40
10821--10863
22
2.0
21
86
13
61
41
0
0
58
0.98
10821--10868
23
2.1
22
88
11
71
41
0
0
58
0.98
12683--12726
2
22.0
2
88
0
61
47
0
2
50
1.13

Tables:   1

The End!