Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013573.1 Corchorus olitorius cultivar O-4 contig13606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15292

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3142--3185
13
3.2
14
81
12
56
50
0
0
50
1.00
3636--3698
22
2.9
22
81
6
74
36
7
15
39
1.77
3633--3849
22
9.8
22
71
11
70
35
9
18
37
1.83
3776--3833
22
2.5
22
83
5
71
37
8
17
36
1.80
3873--4766
22
40.7
22
67
14
231
38
9
16
34
1.82
4462--4545
23
3.7
23
85
7
109
35
5
19
39
1.76
4462--4585
45
2.8
45
79
10
121
36
8
16
38
1.79
4734--4795
22
2.9
22
82
2
63
50
3
17
29
1.62
6071--6122
25
2.2
24
82
6
61
71
3
9
15
1.27
6924--6964
22
2.0
22
90
9
68
21
24
19
34
1.97
8614--8864
138
1.8
138
82
0
322
20
23
18
37
1.94
8964--9337
126
3.0
126
96
0
685
22
24
15
37
1.92
14423--14483
31
2.0
31
90
6
97
27
21
9
40
1.85

Tables:   1

The End!