Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013575.1 Corchorus olitorius cultivar O-4 contig13608, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19280

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
835--866
13
2.5
13
100
0
64
12
12
0
75
1.06
2610--2643
12
2.7
13
90
4
52
50
2
0
47
1.16
3323--3379
29
2.0
29
82
0
69
45
1
5
47
1.35
3552--3609
16
3.6
16
72
21
57
44
0
31
24
1.54
3564--3627
10
6.3
10
72
16
51
42
0
31
26
1.56
3931--4005
38
1.9
39
94
2
134
44
13
1
41
1.52
8940--8970
14
2.2
14
94
0
53
25
22
9
41
1.84
13875--13974
22
4.5
22
76
7
89
40
11
11
38
1.76
13875--14017
21
6.6
21
71
9
76
34
13
10
41
1.79
13875--13980
44
2.4
44
83
7
119
39
12
10
37
1.77

Tables:   1

The End!