Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013582.1 Corchorus olitorius cultivar O-4 contig13615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30195

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1529--1569
18
2.3
18
82
0
55
26
14
12
46
1.80
13363--13388
6
4.3
6
100
0
52
46
38
15
0
1.46
21127--21170
19
2.3
19
88
0
61
31
20
6
40
1.79
27518--27606
44
2.0
44
100
0
178
8
15
25
49
1.74
29662--29717
29
1.9
29
85
0
76
26
0
7
66
1.18

Tables:   1

The End!