Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013608.1 Corchorus olitorius cultivar O-4 contig13641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38611

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
471--637
87
1.9
88
96
1
309
49
6
10
32
1.63
2062--2112
7
7.4
7
85
14
63
43
0
11
45
1.40
2065--2112
18
2.8
16
79
14
60
43
0
12
43
1.42
14423--14515
40
2.3
42
83
9
120
38
1
13
46
1.51
15768--15801
2
17.0
2
93
0
59
50
2
0
47
1.16
18532--18557
12
2.2
12
100
0
52
26
15
7
50
1.71
19649--19682
8
4.2
8
88
0
50
58
8
2
29
1.43
22623--22669
24
2.0
24
86
0
67
14
4
17
63
1.45
27328--27382
28
2.0
28
81
0
65
50
9
9
30
1.65
27608--27654
20
2.3
21
88
3
69
65
6
8
19
1.41
28969--29004
19
1.9
18
88
5
54
33
22
2
41
1.68
30457--30559
29
3.6
29
89
2
147
12
10
35
40
1.78
31380--31416
6
6.2
6
100
0
74
83
0
16
0
0.64

Tables:   1

The End!