Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013619.1 Corchorus olitorius cultivar O-4 contig13652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27545

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
971--1016
24
2.0
23
91
4
74
54
6
8
30
1.56
1138--1344
103
2.0
103
95
0
371
44
9
5
40
1.60
1397--1432
2
17.5
2
94
5
63
47
0
2
50
1.15
3551--3587
11
3.5
11
96
3
67
13
0
0
86
0.57
5514--5573
21
3.0
20
70
15
52
20
8
5
66
1.37
5517--5567
24
2.1
25
85
10
70
19
7
3
68
1.30
10472--10539
26
2.6
26
92
0
118
19
16
5
58
1.57
10522--10588
21
3.2
21
74
4
64
16
20
10
52
1.73
10553--10667
36
3.2
35
70
14
92
18
22
6
52
1.69
10573--10710
36
3.9
35
79
6
143
18
23
4
52
1.63
10573--10710
72
1.9
72
83
5
181
18
23
4
52
1.63
10812--10964
32
4.7
32
84
4
173
26
18
6
48
1.72
10812--10964
65
2.4
65
83
1
200
26
18
6
48
1.72
11882--11986
51
2.1
51
83
3
131
33
27
6
32
1.83
17299--17881
290
2.0
290
97
0
1112
20
18
26
34
1.95

Tables:   1

The End!