Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013624.1 Corchorus olitorius cultivar O-4 contig13657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41449

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--103
21
4.9
21
93
0
170
28
14
28
29
1.95
1024--1055
15
2.1
15
100
0
64
15
6
28
50
1.68
3427--3489
31
2.0
31
93
0
108
42
20
9
26
1.83
8786--8854
30
2.3
30
85
2
86
37
23
13
26
1.91
20459--20485
4
6.8
4
100
0
54
51
22
0
25
1.48
28776--28804
15
1.9
15
100
0
58
48
10
0
41
1.37
37618--37656
21
2.0
21
90
10
64
33
12
7
46
1.71
41120--41252
49
2.8
47
91
5
207
35
21
7
35
1.82

Tables:   1

The End!