Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013628.1 Corchorus olitorius cultivar O-4 contig13661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6110

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2565--2643
29
2.9
27
83
12
99
43
13
8
34
1.76
2565--2643
26
2.9
27
85
12
99
43
13
8
34
1.76
2653--2706
25
2.0
25
89
10
81
44
11
9
35
1.72
2685--2758
22
3.4
21
78
12
78
39
14
10
35
1.82
2685--2763
23
3.5
23
75
11
76
40
16
10
32
1.82
3111--3151
15
2.7
15
92
3
64
63
14
9
12
1.52
3912--3937
11
2.4
11
100
0
52
69
7
15
7
1.35
5669--5704
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!