Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013629.1 Corchorus olitorius cultivar O-4 contig13662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11741

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--184
89
2.1
89
96
0
341
33
19
23
24
1.97
1--218
89
2.4
89
90
1
312
32
19
24
23
1.98
3050--3076
13
2.1
13
100
0
54
33
7
7
51
1.58
5716--5818
49
2.1
49
98
0
197
42
16
7
33
1.77
6821--6872
27
1.9
27
92
0
86
30
25
15
28
1.96
11244--11273
2
15.0
2
92
0
51
46
0
0
53
1.00

Tables:   1

The End!