Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013630.1 Corchorus olitorius cultivar O-4 contig13663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12773

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
913--1015
33
3.2
30
65
19
80
47
7
4
39
1.54
1300--1363
3
21.3
3
93
0
110
31
1
1
65
1.11
3945--3991
24
2.0
24
100
0
94
34
0
17
48
1.47
3948--3999
24
2.2
24
89
0
77
32
0
19
48
1.49
4800--4847
24
2.0
24
91
0
78
35
0
12
52
1.40
4972--5006
6
5.7
6
96
3
61
48
0
14
37
1.44
10983--11110
65
2.0
61
86
5
175
45
11
17
25
1.82
12241--12266
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!