Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013636.1 Corchorus olitorius cultivar O-4 contig13669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38317

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10452--10624
89
1.9
89
90
2
276
53
18
11
16
1.73
11215--11249
13
2.7
13
95
0
61
25
20
0
54
1.45
11611--12016
201
2.0
203
95
0
726
36
18
17
26
1.94
17749--17787
5
7.8
5
94
0
69
56
20
2
20
1.54
18247--18335
46
1.9
46
95
0
160
22
10
22
44
1.82
21576--21627
25
2.1
25
100
0
104
36
15
11
36
1.84
21581--21634
25
2.2
25
89
0
81
38
16
9
35
1.81
23375--23400
2
13.0
2
100
0
52
50
0
50
0
1.00
37195--37230
14
2.6
14
91
4
56
38
2
22
36
1.69

Tables:   1

The End!