Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013639.1 Corchorus olitorius cultivar O-4 contig13672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58103

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3913--3993
41
1.9
43
90
5
130
25
32
4
37
1.78
16037--16071
7
5.1
7
93
3
54
8
0
14
77
0.99
16037--16077
14
2.9
14
88
0
55
7
2
12
78
1.06
18919--18984
31
2.1
31
91
0
105
31
12
18
37
1.87
28493--28518
2
13.0
2
100
0
52
50
0
0
50
1.00
30289--30394
32
2.9
39
81
18
163
24
11
22
41
1.86
32066--32139
36
2.1
36
94
0
130
32
8
17
41
1.79
32171--32391
110
2.0
110
94
0
388
33
14
18
33
1.91
38114--38140
2
13.5
2
100
0
54
48
0
0
51
1.00
45396--45424
12
2.4
12
100
0
58
55
0
10
34
1.34
52117--52162
19
2.4
19
100
0
92
15
21
32
30
1.94
55703--55728
13
2.0
13
100
0
52
61
7
7
23
1.49
56753--56985
116
2.0
116
99
0
457
41
15
16
27
1.87

Tables:   1

The End!