Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013645.1 Corchorus olitorius cultivar O-4 contig13678, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44455

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
335--368
17
2.1
17
88
5
52
50
11
11
26
1.73
7057--7640
303
1.9
298
86
1
808
34
19
19
26
1.96
9081--9128
11
4.7
11
78
21
52
39
6
20
33
1.78
15272--15877
302
2.0
303
88
0
910
33
18
20
27
1.96
32421--32456
19
1.9
18
88
5
54
41
8
22
27
1.82
32409--32468
30
2.0
30
83
6
77
41
8
18
31
1.80
33735--33777
22
2.0
22
81
9
52
16
9
11
62
1.53

Tables:   1

The End!