Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013646.1 Corchorus olitorius cultivar O-4 contig13679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22151

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3809--3953
76
1.9
75
91
4
240
42
19
17
21
1.90
3803--4009
73
2.8
72
84
9
251
42
17
17
23
1.89
4158--4205
17
2.8
17
83
0
60
27
8
20
43
1.80
7517--7610
3
31.0
3
95
2
152
29
0
3
67
1.07
8063--8116
21
2.6
21
85
5
65
46
25
9
18
1.79
8052--8368
78
4.1
78
90
1
476
41
20
11
27
1.86
8141--8194
21
2.6
21
79
5
56
44
22
12
20
1.85
8209--8265
21
2.7
21
84
10
71
42
21
14
22
1.88
8550--8607
21
2.8
20
76
7
62
44
17
12
25
1.83

Tables:   1

The End!