Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013649.1 Corchorus olitorius cultivar O-4 contig13682, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29301

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9322--9354
14
2.5
13
86
13
50
48
33
6
12
1.65
11508--11602
30
3.1
30
80
18
115
51
8
14
25
1.70
13271--13328
22
2.6
22
88
0
80
39
17
15
27
1.90
13730--13789
29
2.1
29
100
0
120
35
10
18
36
1.84
17607--17796
96
2.0
95
81
8
224
34
11
3
51
1.54
20579--20643
21
3.1
21
66
16
62
50
16
6
26
1.68
20713--20824
57
2.0
56
94
1
197
37
1
25
34
1.67
21011--21056
7
6.6
7
100
0
92
43
0
13
43
1.43
21576--21843
132
2.0
130
91
1
428
38
10
1
50
1.47
23384--23457
28
2.7
28
76
14
73
39
16
20
24
1.92
25042--25102
30
2.0
30
96
0
113
49
3
21
26
1.65
26194--26290
45
2.2
45
88
1
142
35
5
23
36
1.77

Tables:   1

The End!