Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013650.1 Corchorus olitorius cultivar O-4 contig13683, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75054

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13072--13105
18
2.0
16
88
11
50
58
0
2
38
1.13
17781--17842
27
2.3
27
80
8
72
61
3
3
32
1.28
17834--17895
17
3.7
17
81
8
65
59
3
3
33
1.29
18215--18286
19
4.1
19
71
23
68
34
0
29
36
1.58
21539--21583
17
2.6
17
85
0
54
37
26
24
11
1.89
23418--23459
12
3.5
12
86
0
57
42
2
33
21
1.66
23725--23776
27
1.9
27
84
7
70
26
15
32
25
1.95
30756--30782
2
13.5
2
100
0
54
51
0
0
48
1.00
35023--35056
2
17.5
2
93
6
61
50
0
0
50
1.00
48130--48154
1
25.0
1
100
0
50
0
0
0
100
0.00
48541--48578
3
13.0
3
83
5
51
31
5
0
63
1.17
63987--64021
5
7.0
5
93
0
61
0
0
17
82
0.66
64287--64316
6
4.8
6
95
4
51
80
0
0
20
0.72
70050--70080
9
3.3
9
95
4
53
9
0
0
90
0.46
70049--70080
10
3.3
10
91
8
57
9
0
0
90
0.45
70050--70088
19
2.1
19
90
0
60
12
2
0
84
0.72
74056--74083
13
2.2
13
100
0
56
28
35
0
35
1.58

Tables:   1

The End!