Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013654.1 Corchorus olitorius cultivar O-4 contig13687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29897

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4474--4519
24
1.9
24
95
0
83
36
6
15
41
1.73
8462--8706
123
1.9
123
86
8
341
37
11
1
50
1.48
8462--8706
131
1.9
123
89
6
373
37
11
1
50
1.48
17423--17523
30
3.4
30
74
0
94
25
20
25
27
1.99
19322--19354
17
1.9
17
93
0
57
30
9
21
39
1.84
25053--25087
18
1.9
18
94
0
61
34
28
5
31
1.81
25434--25755
161
2.0
161
97
0
608
26
22
20
30
1.98
26159--26197
21
1.9
20
89
5
60
25
10
0
64
1.25
26468--26508
21
2.0
21
85
4
57
29
17
12
41
1.85

Tables:   1

The End!