Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013660.1 Corchorus olitorius cultivar O-4 contig13693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24894

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--198
17
2.6
16
78
10
50
6
41
6
44
1.58
2035--2109
27
2.7
28
85
4
98
37
25
16
21
1.93
5639--5700
29
2.1
29
90
0
97
12
9
16
61
1.56
7272--7339
29
2.3
29
87
0
100
14
8
14
61
1.55
8899--8966
29
2.3
29
87
0
100
14
8
14
61
1.55
22476--22562
42
2.0
43
91
2
140
22
9
11
56
1.63
23806--23842
19
2.0
19
89
5
58
32
2
0
64
1.07
24114--24138
11
2.3
11
100
0
50
64
0
0
36
0.94
24112--24141
14
2.2
13
94
5
51
63
0
0
36
0.95

Tables:   1

The End!