Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013662.1 Corchorus olitorius cultivar O-4 contig13695, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39564

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--128
55
2.1
55
100
0
230
39
16
21
22
1.92
2494--2587
45
2.2
43
86
7
129
37
21
6
35
1.79
22367--22406
21
1.9
21
94
0
71
40
17
15
27
1.89
26401--26503
52
2.0
52
96
0
188
22
11
17
48
1.79
26476--26522
24
2.0
24
95
0
85
23
12
12
51
1.74
34039--34204
92
1.9
88
80
12
198
37
5
12
44
1.65

Tables:   1

The End!