Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013669.1 Corchorus olitorius cultivar O-4 contig13702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26626

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1376--1411
19
1.9
18
88
5
54
27
22
8
41
1.82
12462--12493
2
16.0
2
100
0
64
50
0
0
50
1.00
15847--15969
32
3.8
32
84
0
147
24
18
19
37
1.94
15847--15973
64
2.0
64
90
0
200
25
18
18
37
1.94
18380--18425
21
2.2
21
88
0
65
21
30
19
28
1.98
24921--24976
26
2.3
24
80
14
69
50
26
3
19
1.64
24930--24986
26
2.2
26
90
3
89
50
26
5
17
1.67

Tables:   1

The End!