Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013672.1 Corchorus olitorius cultivar O-4 contig13705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30076

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7511--7620
38
2.9
39
87
4
145
22
18
35
23
1.96
7526--7620
39
2.5
38
89
5
147
21
15
37
25
1.93
7651--7676
6
4.3
6
100
0
52
15
0
34
50
1.45
12579--14435
935
2.0
930
87
4
2650
28
15
21
34
1.94
14670--14703
10
3.6
9
92
4
50
88
2
0
8
0.62
26827--26896
9
7.6
9
87
6
104
51
11
0
37
1.38
26827--26901
19
4.0
19
96
1
134
50
10
0
38
1.37
26828--26896
28
2.5
28
88
4
95
52
10
0
37
1.36

Tables:   1

The End!