Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013678.1 Corchorus olitorius cultivar O-4 contig13711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1227

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--727
54
10.0
54
79
7
512
33
21
16
28
1.95
266--727
107
4.3
106
81
7
463
33
20
16
28
1.95
266--727
161
2.9
161
88
2
635
33
20
16
28
1.95
693--939
35
6.8
35
86
7
289
40
18
13
27
1.88
910--1168
54
4.8
54
81
7
197
33
22
15
28
1.94
975--1181
54
3.8
54
84
5
265
34
19
14
30
1.93

Tables:   1

The End!