Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013679.1 Corchorus olitorius cultivar O-4 contig13712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25783

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4414--4498
2
44.5
2
73
21
58
44
3
0
51
1.18
4406--4489
30
2.8
31
80
18
83
41
4
0
53
1.22
4372--4498
44
2.9
45
78
15
117
40
3
0
55
1.18
15162--15562
206
2.0
201
91
2
649
33
6
14
44
1.71
20116--20176
23
2.7
23
85
5
81
36
13
9
40
1.77
20227--20304
21
3.6
21
77
10
68
28
15
11
44
1.81
23565--23625
32
1.9
32
86
6
88
49
4
19
26
1.69
24966--24997
16
2.0
16
93
0
55
46
0
0
53
1.00
24940--24989
25
1.9
27
88
8
77
42
0
4
54
1.19
24961--25013
19
2.8
19
82
8
63
49
0
0
50
1.00
25016--25090
35
2.1
35
97
0
141
41
18
17
22
1.90

Tables:   1

The End!