Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013684.1 Corchorus olitorius cultivar O-4 contig13717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6602

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--640
50
11.8
50
96
0
1063
26
12
28
32
1.93
718--921
91
2.2
91
91
0
318
37
16
19
27
1.92
1355--1450
50
1.9
50
91
0
156
37
14
15
32
1.88
2013--2039
13
2.1
13
100
0
54
14
0
14
70
1.17
2022--2081
17
3.5
16
76
19
59
18
0
16
65
1.28
2025--2085
19
3.4
19
76
23
69
18
0
16
65
1.27
2032--2085
16
3.4
16
72
22
51
18
0
16
64
1.29
2462--2500
14
2.6
14
88
8
51
17
15
0
66
1.25

Tables:   1

The End!