Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013692.1 Corchorus olitorius cultivar O-4 contig13725, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38583

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97--152
29
2.0
28
89
3
85
30
10
19
39
1.86
774--799
2
13.0
2
100
0
52
50
0
0
50
1.00
974--1000
12
2.2
12
100
0
54
0
40
7
51
1.30
27519--27543
2
12.5
2
100
0
50
0
48
0
52
1.00
38473--38515
20
2.3
18
88
11
61
34
9
11
44
1.73

Tables:   1

The End!