Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013697.1 Corchorus olitorius cultivar O-4 contig13730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41342

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5678--6005
41
7.8
42
81
10
366
20
11
26
42
1.86
5675--6005
84
3.9
85
91
2
517
21
11
25
41
1.86
7624--7649
3
8.7
3
100
0
52
65
0
34
0
0.93
19186--19221
18
2.0
18
89
10
56
36
8
5
50
1.56
19880--19938
30
2.0
30
90
6
93
61
5
11
22
1.50
29087--29139
22
2.4
22
81
6
63
18
7
11
62
1.52
37450--37495
24
2.0
22
84
16
58
10
6
17
65
1.45
38403--41342
154
19.1
154
88
3
4272
22
18
18
40
1.91
38403--41342
307
9.5
307
89
2
4246
22
18
18
40
1.91

Tables:   1

The End!