Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013704.1 Corchorus olitorius cultivar O-4 contig13737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11634

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--41
2
20.5
2
100
0
82
48
0
0
51
1.00
1251--1302
24
2.2
24
89
0
77
32
30
11
25
1.91
2857--3042
38
4.9
38
87
1
248
22
18
34
25
1.96
4342--4380
20
2.0
20
94
0
69
38
10
25
25
1.87
4344--4387
20
2.2
20
83
0
52
43
6
20
29
1.78
8000--8143
51
2.8
51
85
4
182
22
20
15
40
1.90
9449--9477
10
3.0
10
95
5
51
72
0
0
27
0.85

Tables:   1

The End!