Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013712.1 Corchorus olitorius cultivar O-4 contig13745, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35644

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9071--9165
47
2.0
48
95
2
174
29
18
18
32
1.96
13209--13239
2
15.0
2
93
6
53
3
0
48
48
1.17
21874--21941
31
2.3
31
84
5
95
50
13
17
19
1.78
22061--22139
31
2.5
31
89
0
113
35
16
10
37
1.82
23026--23056
16
1.9
16
100
0
62
32
19
0
48
1.49
23113--23158
16
2.9
16
80
3
58
54
0
4
41
1.20
23659--23722
31
2.1
31
90
0
101
35
10
15
37
1.83
26937--26990
15
3.5
15
85
10
65
16
72
0
11
1.12
28176--28202
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!